Psst! I've posted some details about my notebook setup here.

Summary table for iLocus paper

I created a table for my iLocus paper tonight, and wanted to capture the commands used to populate it while everything is still fresh in my mind.


Is RefSeq's Arabidopsis annotation TAIR10?

Some notes on my data forensics to determine whether there are any differences between the RefSeq Arabidopsis annotation and TAIR10.


Cleanup: supplementary tables for our genome paper

We submitted a genome paper to Genome Biology over the weekend. I'm going through our repository and tidying things up, and I realized I have not had a chance to record my notes on several of the supplemental tables providing a comparison of genome features across seven species. I'll go ahead and do so here.